Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVSSINQFDSNLYGLLNAKSAPKEDLAPIEGAEKIEREKKDAPTENLPFNPDKRETYGFLVLELMSDREYEAFLRATAGMDESQKRLAAQSLYSLTDFYNGKFSKEVENAPKQPVNGLHKKAFQTFNATNHNAFLQRYQNAYNNPSSMDVVL |
2HIM Chain:B ((233-280)) | ----------------------------------------------------------------------------------------------GVVTIYPGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2746 for 272 contacts (10.1/contact) +
2D Compatibility (PS) -5205 + (NN) -2700 + (LL) 6204
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -2955.0 ( -10.86 by residue)
QMean score : 0.375
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