Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKASIYDFTLDELSQLLKPSFRAKQLYLWLYAKYKTSFKDMQNNFSKDFIAYLEQEFTLRTIEIAHVRESVDGSKKYLFKSLRDNHTFEAVLLKMKDKKIDEETNAVLEGEKYTVCVSCQIGCQVGCSFCFTQKGGFVRDLKASEIIQQ----ALLIKEANNLPIEKALNIVFMGMGEPLNNLDEVCKAVEIF--NTGMQISPKRITISTSGVADKIPILAGKNLGVQLAISLHAVDDKTRSSLMPLNKKYNIECVLNEVRKWPLEQ----RKRVMFEYLLIKDLNDSLDCAKKLLKLLNGIKSKVNLILFNPHEGSKFERPSLESARMFADFLNAKGLLCTIRESKALDIEAACGQLREKKLQQKI |
4PL1 Chain:A ((22-332)) | -----------------KP-FRADQVMKWMYHYCCDNFDEM-TDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWA--------------IAVGDQRV--ETVYIPEDDRATLAVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRY-LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRG------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163853 for 2354 contacts (-69.6/contact) +
2D Compatibility (PS) -32425 + (NN) -10422 + (LL) 4764
1D Compatibility (HY) -22400 + (ID) 5750
Total energy: -230086.0 ( -97.74 by residue)
QMean score : 0.471
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