Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVLGISGASGIPLALRFLEKL-PKEIEIFVVASKNAHVVALEESNINLKNAMKDLRPSAT-----------FFNEQDIHASIASGSYGIHKMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPLLIAPREMPLSAIMLENLLKLAHSNAIIAPPMMTYYTQSKTLEAMQDFLVGKWFDSLGIENDLYPRWGMN
4ZAN Chain:A ((6-201))
-RITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQNDWMAPPASGSSAPNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFFHQPQSVEDLVDFVVARILNTLGIPQDMLPRWGEQ
General information:
TITO was launched using:
RESULT:
Template:
4ZAN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150659 for 1481 contacts (-101.7/contact) +
2D Compatibility (PS) -19991 + (NN) -8996 + (LL) 208
1D Compatibility (HY) -14400 + (ID) 3500
Total energy: -197338.0 ( -133.25 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_4ZAN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZAN-query.scw
PDB file :
Tito_Scwrl_4ZAN.pdb
: