Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNELLKIFLSMALTSVILIPLVWILRRIFNRYLSKGKIYYSWLIVFFFLTIPFAYIFFSFTKDNAFMWRNKTEFDGVTSIVMDQSGIVLQHDFKTVFWMTVLDYIWVAWLVIFLLTFIYRIASYRNFKKYVFSGARRVDDLEQLDILAETIEELNIKRPVELMINPL---ISSPIF----LGLKKNVIVIPDETFSNVELHYIFKHELVHCKRKDMYYVWMVQFFTCIYWFNPLMYLMNKRIQMDRELACDEAVLATLSKSKYIGYGDTLLSSLAKSGNYKESYVAVSLHENTKALKERLMFIANYKAQNKKHNILFSISMIVLCIVGVLFSAFQADVFTLEKKKGITIERRK |
4JIX Chain:B ((14-81)) | ------------------------------------------------------------------------------------------------------------------------------------------------DIVNEILISLNINESINIEIKPMKQKIASFSFKTKTLRLNKYVV----ENFDEELLHYIILHELIHFKIKSI----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41335 for 359 contacts (-115.1/contact) +
2D Compatibility (PS) -6386 + (NN) -925 + (LL) 26968
1D Compatibility (HY) -8400 + (ID) 1350
Total energy: -31428.0 ( -87.54 by residue)
QMean score : 0.380
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