Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEYQSQLARIQAKITTLKEKDVDLNLFGSESHAYKLNQPLSNQTIAAFENEHQIALPQGYRAFLEQIGDGGMGPYYGLETLVDGLCSSLDYKAEKYGVQTLSKPFPHTDDW---NGPGYKEGMSDEAYDAWQELCFSDKEVFGLLRIANFGCGVSINLVVNGPSYGEIWVDDRNNDNGVYPDFYFGNEERLGFLEWYELWLDKSIEEFEKA |
4L2Y Chain:A ((938-985)) | -----------------------------------------------------------------------------------------LDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCY--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3772 for 184 contacts (20.5/contact) +
2D Compatibility (PS) -4899 + (NN) -1823 + (LL) 9488
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 3438.0 ( 18.68 by residue)
QMean score : 0.334
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