Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQITFYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKHS-GETNYVLVNAKDEQVINQSENKSTTEPGAELSSRQKAK |
2GU3 Chain:A ((70-133)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAKEGISEDKAAKIIKDEG---LVSKQKEVHLAREG---------NVLLWEVTYLDKEGQYSLSYVDFTTGKILKN-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27269 for 419 contacts (-65.1/contact) +
2D Compatibility (PS) -7177 + (NN) -4457 + (LL) 13436
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -27017.0 ( -64.48 by residue)
QMean score : 0.535
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