Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFLHTADLHLGKIV----SGVSMLAEQEYILTQITQIAEEEQVDALILAGD-LYDRAVPPADAVKVLNDILVKWNVELGIPIFAISGNHDSAERLAFGSQWYESSKLYMKGKCTSQFDGIPFMDAEVWLVPYHEP---AIIRQAFADNSIRSF-EDAMQAVTKQIRSKWDTSKAQILVGHAFVSG-----GIPSDSE----RQLAIGNVDRVSTDCFDGFTYTALGHLHHPHAI-RHPSIFYSGSPLKYSFSEANDHKSVRIVELEGK-----ELISVTERFLTPKHDMRIISGTLAELTENLVENPDDFFQVNLMDEGALIDPMGKLRQFYPNILHLERKKQTLKETQDSFEEIMKKDDLELFGQFFEHVNGTELTETQKQKLADVFEQARKEDAE |
| 3THN Chain:A ((1-319)) | MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKR--MMRTAPVVVLPGNQDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGD--FRFFLESRLNKLYEEALKKEDFA---IFMGHFTVEGLAGYA----GREIIINRALIPSVVD-----------YAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPPRYERIDASPLPLKTLYYKKIDTSALKSIRDSCRNFPGYVRVVYEEDS--LPDLMGEID----NLVKIER--------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3THN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115985 for 2268 contacts (-51.1/contact) +
2D Compatibility (PS) -30653 + (NN) -5001 + (LL) 5312
1D Compatibility (HY) -10400 + (ID) 4350
Total energy: -161077.0 ( -71.02 by residue)
QMean score : 0.435
|
|
|