Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LMKHLTLWHTNDVHSHLEHWPRIFN--FLKEKRTAAD-------KENQSALFFDIGDFLDRVHPLTEGTNGLANTDLLNQLPYDVVTFGNNEG----TTLAHEDLDKLYEHAVFPVVCCNFYTNKECTEQPDWVKSIVYKEIEQVKIAIIGATAP------FRDYYEEMGWGIEEPISSIKKQVAGLD--EDTDVVILLSHLG----------LPSDERIALEIP--EVDVILGGHTHHLL--------ETGKIEGNAL---------LAAAGRWGEYIGKVDIELDE------NNQILT---KTAMTF---KTEDLPAAPNEANEIQ------GFFDKGRAELSEKVVAIPGKLAHNW----FDDSEIAHILNEAVCEWTGAETFVMNAGIFMTDFEAGIVTDFDIHQMLPHPLNAIALTMSGEELEILIDGIYRKKAELQDIPLRGFGFRGEYFGTVLMERAGFDAENQVALFDNKPIDKTREYRIATHDTFVFAPFFPIVKQIKRKEVYTPELLRDILKWKLKKMYGQEEDK |
1HO5 Chain:A ((9-470)) | ----ITVLHTNDHHGHF--WRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQE-----KWAKFPLLSANIY--QKSTGERLFKPWALFKR-QDLKIAVIGLTTDDTAKIGNPEYFTDIEF--RKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPD-----------SGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMAT--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163017 for 3131 contacts (-52.1/contact) +
2D Compatibility (PS) -40783 + (NN) -3768 + (LL) 5612
1D Compatibility (HY) -16400 + (ID) 5300
Total energy: -223656.0 ( -71.43 by residue)
QMean score : 0.339
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