Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKSKLELLFTKISHVMNVWQATFFAAVSWVLALITIQTIYLWSISIRDDSLFLREVSQAIVQLFGTNKYTRIMQSFWMMSLKFLIIFLIACLFFAFFYRLMRQRILKKQLRTINFALNDGKPVDTESFVPEIQELERNIENMRERQKKLMQQEEQAQQARNDLITNVSHDLRTPLTSILGYLSYIHEDRYRDEIELRYYTELVYGKARHLHKLIDDLFSYTRLDSVDYQLKKDELDIVELL--RQLVAEYDGRAAERNMQIVEHFDANKLIIGGDGNQIMRLFENLFSNALRYGEGNKQIDVSAKKEDNMAVVRVTNYGEEIPNVDLPYLFERFYKVDKNRTTTGTGLGLAIAKSIVEKHGGIVTAESKKRQTS-FIVKLPLI |
| 4Q20 Chain:A ((35-254)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------EAERLKRDFVGNVSYELRTPLTTIIGYSELLERAD--SE-RGRNHVAAVRAAATQLARSIDDVLDMAQIDAGEMALEIEDIRVSDLLLNAQERALKDAQLGGVTLAVECEEDVG--LIRGDGKRLAQTLDHLVENALRQTPPGGRVTLSARRALGEVRLDVSDTGRGVPFHVQAHIFDRFVGRDRG----GPGLGLALVKALVELHGGWVALESEPGNGSTFTCHLP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53891 for 1596 contacts (-33.8/contact) +
2D Compatibility (PS) -22998 + (NN) -7034 + (LL) 17572
1D Compatibility (HY) -10400 + (ID) 3350
Total energy: -80101.0 ( -50.19 by residue)
QMean score : 0.370
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