Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVIRKFCTYQKLRVKAFTLLECLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSE---WVLLTQQLNAEFEGAHLEYLRQNKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET |
3ISM Chain:A ((27-101)) | ------------------------------------FPGLDHVRSHSDYVLSYDRRNRVPHWVF--EHLTAE-SVAKNDAVDRSKCDFKQDESIHPFFRSQNTDYRRSGYD-RGHMAAAGNHRLHQKHCDETFYLSNMAPQVGQGFNRDAWNTLEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ISM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8596 for 327 contacts (26.3/contact) +
2D Compatibility (PS) -7449 + (NN) -625 + (LL) 4612
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 84.0 ( 0.26 by residue)
QMean score : 0.208
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