Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSN-GERE--ADFINVVMWGRLAETLASYGTKGSLISVDGELRTRKYE-KDGQTHYITEVLASSFQLLESRSQRAMRENNISGDLSDLVLEEEELPF
3TQY Chain:A ((9-113))
--NKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTEWHRIAFFNRLAEIVGEYLRKGSKIYIEGSLRTRKWQDKNGVDRYTTEIIANEMHMLD----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32682 for 590 contacts (-55.4/contact) +
2D Compatibility (PS) -11256 + (NN) -5054 + (LL) 2376
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -54466.0 ( -92.32 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_3TQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQY-query.scw
PDB file :
Tito_Scwrl_3TQY.pdb
: