Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELLLALLLWNILVFATYAIDKRRAIRGAWRISEKTLLIESLLLGGFGAFLGGEVFRHKTTKWYFRLVWYIGMIIDLAIIWLIWCY
3C9G Chain:A ((263-281))
----------------VTIYLNKQTATVSRINFCD----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3C9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60 for 73 contacts (-0.8/contact) +
2D Compatibility (PS) -2037 + (NN) 699 + (LL) 7536
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 4788.0 ( 65.59 by residue)
QMean score : -0.291
(partial model without unconserved sides chains):
PDB file :
Tito_3C9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C9G-query.scw
PDB file :
Tito_Scwrl_3C9G.pdb
: