Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKFKERFDTLSDAILAIAMTILVLEIKTPATMGDIGDFTRNIGLFIVSFVVVFNFWYERAQNSLDAQKTNDEIIALDIIEHLGICLIPLFTKFMISFENHNFAVMAYGLLTLLVGLTSDIIRIRLASYDLVTIPSELKERVIKVMTTFAIRSVVVRFIIIILAYFLPEVGIFAYLVIPLFMFWRRSRAGKYYAKKGIEAPSYIKLFIQIGERAPEDFTNSSSGIGGVKRLYKK |
| 1KMP Chain:A ((576-619)) | ------------------------------GTRYDDGALTAEMGLFLINF-----------NNQYDSNQTNDTVTARGKTRHTGL----------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10019 for 172 contacts (-58.2/contact) +
2D Compatibility (PS) -4598 + (NN) -168 + (LL) 18004
1D Compatibility (HY) -1200 + (ID) 800
Total energy: 1219.0 ( 7.09 by residue)
QMean score : -0.048
|
|
|