Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKIKIVLVDDHEMVRLGLKSFLNLQADVEVIGEASNGLEGIKKALELRPDVVVMDLVMPEMDGVEATLALLKDWPEAAILVLTSYLDNEKIYPVIEAGAKGYMLKTSSAAEILNAIRKVARGEQAIENEVDKKIKAHDKCPALHEGLTARERDILNLLAKGYDNQRIADELFISLKTVKTHVSNILGKLNVADRTQAVVYAFQHHLVPQDDE
4HYE Chain:A ((22-210))
---MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEGRKEYSPELMEMVMTRPNP------LTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSKLDAGNRTEAANIAKESGWL-----
General information:
TITO was launched using:
RESULT:
Template:
4HYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91619 for 1480 contacts (-61.9/contact) +
2D Compatibility (PS) -20461 + (NN) -11569 + (LL) 1104
1D Compatibility (HY) -12800 + (ID) 2850
Total energy: -138195.0 ( -93.38 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_4HYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HYE-query.scw
PDB file :
Tito_Scwrl_4HYE.pdb
: