Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGDKLKGTVTGIRPYGAFVSLEDGRT---GLIHISEIKT-GYIDNIYDVLSVGDEVYVQVIDVDEFT-QKASLSLRTLEEERHHIQHRHRFSNNRLKIGFKPLEENLPSWVEEGLAYLNNK
2EQS Chain:A ((264-341))
--IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLS---FTGTKTSLSMKDVDQE----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2EQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51449 for 482 contacts (-106.7/contact) +
2D Compatibility (PS) -7493 + (NN) 485 + (LL) 2852
1D Compatibility (HY) -8000 + (ID) 1750
Total energy: -65355.0 ( -135.59 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_2EQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQS-query.scw
PDB file :
Tito_Scwrl_2EQS.pdb
: