Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYKTIKSDGIVEEEIKKSRFICHLKRVESEEEGRNYITQIKKAHYKANHSCSAMVIGEKGDIKRSSDDGEPSGTAGIPMLTVLEKQGLTNVVAVVTRYFGGIKLGAGGLIRAYSGSVANTIKEIGVVEVKEQIGIRIQLTYPQYQTFDNFLKEHHLQEFETEFLE--AVTCKIYVDPKEFEHTITNLTEFYQGKALLTEEGSQIVEIPFKAETDK |
1N0U Chain:A ((701-807)) | ---------------------------------------------------------------------------------------------------------GGGQIIPTMRRATYAGFLLADPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQ--TPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPLDPT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43567 for 649 contacts (-67.1/contact) +
2D Compatibility (PS) -11113 + (NN) -1960 + (LL) 6968
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -52422.0 ( -80.77 by residue)
QMean score : 0.278
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