Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNKKLLITGKILLAILYIIVLFAVCVLAAMAFLSLFGSKLLDVDFFTLFLSDGIFKGGLMLGIVFFLVVLDASI
3OSU Chain:A ((3-11))
-MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEV
General information:
TITO was launched using:
RESULT:
Template:
3OSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 234 for 17 contacts (13.8/contact) +
2D Compatibility (PS) -1071 + (NN) -15 + (LL) 208
1D Compatibility (HY) -400 + (ID) 200
Total energy: -1244.0 ( -73.18 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_3OSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OSU-query.scw
PDB file :
Tito_Scwrl_3OSU.pdb
: