Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLYFPSISEETFDFEADWLVKAMDDNQKRILFVGQGKNGDLELELNYQDNPEPFDNLSVGELVQLPKELFVVPETISYQPQYECF
3SWZ Chain:A ((164-207))
-----------------------------ICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVK
General information:
TITO was launched using:
RESULT:
Template:
3SWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5723 for 157 contacts (36.5/contact) +
2D Compatibility (PS) -4425 + (NN) 1081 + (LL) 2228
1D Compatibility (HY) -3200 + (ID) 900
Total energy: 507.0 ( 3.23 by residue)
QMean score : -0.014
(partial model without unconserved sides chains):
PDB file :
Tito_3SWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SWZ-query.scw
PDB file :
Tito_Scwrl_3SWZ.pdb
: