Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESETTDEKNYRTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANHLTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
1S9A Chain:A ((23-68)) | -------------------------------------------------------------------------------------------------------------------------------------------RHEITTPEYETIMQYMISVGEAGEWPLWLDAFFETTVDSV---SYGKGNWTSSAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 194 for 189 contacts (1.0/contact) +
2D Compatibility (PS) -4581 + (NN) 420 + (LL) 11060
1D Compatibility (HY) -4000 + (ID) 750
Total energy: 2343.0 ( 12.40 by residue)
QMean score : 0.086
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