Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANHRIDRVGMEIKREVNEILRLRVNDPRVQDVTITDVQMLGDLSMAKVFYTIHSTLASDNQKAQIGLEKATGTIKRELGKNLTMYKIPDLQFVKDESIEYGNKIDEMLRNLDKKD
3OMW Chain:A ((44-73))
--------------------------------------------------------------------------------------KLPGMAFDKPNVYEFGTKYEDIYRDLESKD
General information:
TITO was launched using:
RESULT:
Template:
3OMW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5939 for 124 contacts (47.9/contact) +
2D Compatibility (PS) -3211 + (NN) -2321 + (LL) 6852
1D Compatibility (HY) -3200 + (ID) 550
Total energy: 3509.0 ( 28.30 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3OMW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OMW-query.scw
PDB file :
Tito_Scwrl_3OMW.pdb
: