Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKAILLIILIAFVIIAIIKIALLKLYMNTIKPKVDNEGNIITKPVKDDLTPEEREEREFDKDW
2MLY Chain:B ((22-33))
----------------------------------------------------ARTPEMPVLENRA
General information:
TITO was launched using:
RESULT:
Template:
2MLY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1405 for 34 contacts (41.3/contact) +
2D Compatibility (PS) -1224 + (NN) -1050 + (LL) 5336
1D Compatibility (HY) -400 + (ID) 50
Total energy: 4017.0 ( 118.15 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_2MLY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MLY-query.scw
PDB file :
Tito_Scwrl_2MLY.pdb
: