Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRKQFIKLGIATLLTVISLYTPINLATNHTTENIVTAQEYKTKENGTLPFKHKRQLVLGELDDKGRATFAHIQLKVKDEPKKKRVKRLKTTPVGWHNFKFYYNDGTQKAWLMSRGRLICHQFSGLNNERKNLVPMTNWLNTGNYNSTNSSNPESMLFYEKQLKTWLSTHKNYYLDYKVTPIYQNNELIPRKIELKYVGIDKTGKLLPIFIGNKSTQDQFGISTV----TLENTSPNATIDYLSGKAQNT-VLSAKEQRKLIAKHEEEKRLAEKKVEEEKAAAETQKKLEEEQARLAAEAQRKQKEEQARLAAETQKKQETLVQEQTSQGYKRD----YRGRWHRPNGQYASKAEIAAAGLQW |
| 4NA3 Chain:A ((411-564)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPYLQLTDSPFY----IVQEKQEWKSV-TDRDGNELPRRAGISS----FGIGGVNAHIVIEEYMP---------EQPNVIVLSAKNKSRLIDRASQLLEVIRNK-----------KYTDQDLHRIAYTLQVGREEMDERLACVAGTMQELEEKLQAFVDGKEETDEFFRGQSHRNKETQTIFTADEDMALAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 43905 for 699 contacts (62.8/contact) +
2D Compatibility (PS) -14444 + (NN) -6061 + (LL) 12564
1D Compatibility (HY) -3200 + (ID) 2300
Total energy: 30464.0 ( 43.58 by residue)
QMean score : 0.189
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