Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKIISLGEVLLRLSPPQYHTLMQANHLKCQFGGSELNVLASLAQLGHHVGLVSALPDNDLGKMARQFILSQQISPAAI-IKKEGRLGIYYYEQGFSVR-TNKVIYDRNYSSFWESTLSDYDFTSIFKGVDWFHVSGITPALTKDLYEVTRFLMTKAKEGGVKVSIDLNFRESLWSSFQEAREQLSPLLGLLDVCFGLEPIYLAGESEDLKDELGLSRPYLDIELLEKITQKIVQEYGLDYIAFTQREMEYTNQYMLKSYLYHNNMLYQTDKTGVEVLDRVGTGDAFAAGLIHALLEKETPQRALEIAMATFKYKHTIQGDI-NIMTRDDIAYLIEKETNDIKR |
1WYE Chain:A ((2-302)) | -AKLITLGEILIEFNALSPGPLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYV-KSADLVHSSGITLAISSTAKEA----VYKAFEIASNRSFDTNIRLKLWSA-EEAKREILKLLSKFHLKF------LITDTDDSKIILGESDPDKAAKAFSDYAEIIVMKLGPK-----------------GAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKDIETFLREMK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124448 for 2767 contacts (-45.0/contact) +
2D Compatibility (PS) -32166 + (NN) -10651 + (LL) 3836
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -181479.0 ( -65.59 by residue)
QMean score : 0.438
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