Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNHKTKKLTVLAIMIALDVFLTPIFRIEGMAFMSSVVNIIAGVIMGPIYALVMALVTAFIRILTQAGVASVAPLAILGAGPGAFLAGWLYQFYAKDWMSWVGEFIGTGIIGALLSAPIMVWFWTWTADGNHEVLAKASAAQSIFLFMPRFIGATIIGGVIALLLLQGLKRVPVFMTIQALFKGEKVK |
| 3J9X Chain:A ((72-98)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------GFGLKVARALNRIGSGPALVNMINGLKGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12069 for 128 contacts (-94.3/contact) +
2D Compatibility (PS) -3023 + (NN) -3307 + (LL) 14312
1D Compatibility (HY) -800 + (ID) 250
Total energy: -5137.0 ( -40.13 by residue)
QMean score : 0.114
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