Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSLSEIKDKILSTEKTSKITSAMQMVSSAKLVKSEQAARDFQVYASKIRQITTNLLKSDLVSGSDNPMLASRPVKKTGYIVITSDKGLVGGYNSKILKAMMDTITDYHTENDDYAIISIG-SVGSDFFKARG--MNVSFELRGLEDQPSFDQVGKIIAQAVEMYKNEL-FDELYVCYNHHVNSLTSQVRMQQMLPIKELDADEASEDRVITGFELEPNREVILEQLLPQYTE----SLIYGAIIDAKTAEHAAGMTAMQTATDNAKNVINDLTIQYNRARQAAITQEITEIVAGANALE |
2W6H Chain:G ((1-272)) | --ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYE---KADIKTPE-------------LIIGVSSDRGLCGAIHSSVAKQMKSEAANL----KEVKIIGVGDKIRSILHRTHSDQFLVTFKEVG-RRPPTFGDASVI---ALELLNSGYEFDEGSIIFNRFRSVISYKTEEK---PIFSLDTISSAESMSIY--------DDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -42870 for 1867 contacts (-23.0/contact) +
2D Compatibility (PS) -27167 + (NN) -4351 + (LL) 2756
1D Compatibility (HY) -17200 + (ID) 4000
Total energy: -92832.0 ( -49.72 by residue)
QMean score : 0.403
|
|
|