Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIKKLLGLTTTVVISALILGACGQSKNEDAKVVRVGTMVKSKTEKARWDKIEELVKKKGVKLKFTEFTDYTQPNKALESDEIDINAFQHYNYLNNWNKANKTNLVSVAETYFTSFRLYSGTKNGKGKYQTVSEIPNKATITIPNDAVNESRSLYLLQSAGLLKLKVSGDTL-ATMSDVVSNPKSLDLKEVDAAQTARSLDSTDAAVINNDFVTEAGINPKSAIFIEPKSKNAKQWYNLLVAQKGWQDKSKAKAIKEVVKAYHTDAVKKVIEKTSQGLDQPVW |
3GXA Chain:A ((35-258)) | ------------------------------------GDMVK--------EQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKEHNLDITEVFQVPTAPLGLYP------GKLKSLEEVKDGSTVSAPNDPSNFARVLVMLDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAISSGMKLTEALFQEP-SFAYVNWSAVKTADK------DSQWLKDVTEAYNSDAFKAYAHKRFEGYKSPAA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -42183 for 1764 contacts (-23.9/contact) +
2D Compatibility (PS) -23611 + (NN) -8300 + (LL) 3760
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -87534.0 ( -49.62 by residue)
QMean score : 0.438
|
|
|