Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPQTLRRLDVKKQFIEKIEPFAHRQTLKSKAVNSSKTTMSIQRYNHSGTKIQLRIGY-SKVLIRIFSNGKINLTHYDLFFDREETLEITDAFDNGVYTQDEVDGFIKQAKTFIKQALKGEV
2JU7 Chain:A ((13-67))
----------------ENFEPFMKAMGLPEDLIQKGKDIKGVSEIVHEGKKVKLTITYGSKVIHNEFTLGEECELETMTGEKVKAVVKMEGDNKMVTTFKGIKSVTEFNGDTITNTMTLGDI
General information:
TITO was launched using:
RESULT:
Template:
2JU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2199 for 254 contacts (-8.7/contact) +
2D Compatibility (PS) -5888 + (NN) -3591 + (LL) 1544
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -14984.0 ( -58.99 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_2JU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JU7-query.scw
PDB file :
Tito_Scwrl_2JU7.pdb
: