Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHS-VVYGYP-AIAIPL-------KNIEVTCLIEEAPQLIALDMTD--------PLSTAIFAALDYLGKTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVFDYFDEDLEADLLECLVNRAEMIAHSNPSG-LDAKTCL--SENTIKFI--RNIGFSTVPMHLNAYLVIADTGIH-------GHTKEAVDKV--KSSGEAV-------LPFL--KELGYLAEAS------EDAIHKSDSKQLGSLMTKAHQSL-KQLGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVKEKREAERLSQQLEREGAVNTWTEKV |
| 2DEJ Chain:A ((5-328)) | --------KSPGRVNLIGEHTDYTYGYVMPMAINLYTKIEAEKHGEVILYSEHFGEERKFSLNDLRKENSWIDYVKGIFWVLKESDYEVGGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGNVIFLDTHTLDYEYIPFPKDVSILVFYTGVRSSEYAERKHIAEESLKILGKGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKILTTAHWDLAKNYEVSCKELDFFVERALKLGAYGARLTGAGFGGSAIALV-DKEDAETIGEEILREYLKRFPWKAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DEJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142664 for 2167 contacts (-65.8/contact) +
2D Compatibility (PS) -29404 + (NN) -10232 + (LL) 496
1D Compatibility (HY) -19200 + (ID) 4100
Total energy: -205104.0 ( -94.65 by residue)
QMean score : 0.533
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