Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGFDVICAAVSTLSINFINSLEALTT--CQAQLIINDVEGGYMKIDLSSIPQHKEDKVQLLFESYLLGMTNLSKDSSEFVSTIVMTH
2G0I Chain:A ((35-144))
MIQATFIRR-KGILESVELTGHA-SGEYGFDIVCAAVSTLSMNLVNALEVLADCTVSLQ-MDE-FDGGYMKIDLSYITNKSDEKVQLLFEAFLLGITNLAENSPEFVTAKIMTQ
General information:
TITO was launched using:
RESULT:
Template:
2G0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71259 for 763 contacts (-93.4/contact) +
2D Compatibility (PS) -11275 + (NN) -2792 + (LL) 48
1D Compatibility (HY) -14400 + (ID) 3150
Total energy: -102828.0 ( -134.77 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_2G0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G0I-query.scw
PDB file :
Tito_Scwrl_2G0I.pdb
: