Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTDSKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDPSKAADVFSLPHDQLGQLVESGVIQEIPEQY--SKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSY-ETITSKGKFGQQLKAANSYVTGPLFLSVGDTLFGKSGEDAKGTNWG--NEAGVSVLKWIADQKKNDGFVNLTAENTMSK--FGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAAYLTNAESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIK----SSDYLKRLKQFDKDIAKTK |
| 1URS Chain:A ((89-395)) | -------------------------------------------------------------------------------------------VFGMPHDNNGVFAEEGLMAPVPSGVLNTGLYAPN----TIDAIKVNGTMYSVPVSVQVAAIYYNK-KLVPQPPQTWAEFVKDANAHGFMYDQANLYFDYAIIGGYGGYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHWMTPSTNGSIAKAEFLAGKIGMYVSGPWDTADIEKA--KIDFGVTPWPTLPNGKHAT---PFLGVITAFVNK-----ESKTQAADWSLVQALTSAQAQQMYFRDSQQIPALLSVQRSSAVQSSPTFKAFVE---QLRYAVPMPNIPQMQAVW-QAMSILQNIIAGKVSPEQGAKDFVQNIQKG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1URS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35151 for 2477 contacts (-14.2/contact) +
2D Compatibility (PS) -31065 + (NN) -9866 + (LL) 7340
1D Compatibility (HY) -21200 + (ID) 4050
Total energy: -93992.0 ( -37.95 by residue)
QMean score : 0.393
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