Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRILNSQFAVYKNWPSWLLLLFACFMVYLFFFVGLTLGGVGIVLVSSVLYKFSSYTFFEFINLFNNIYGELGTFSFSAFLLLIWVKFVEKRPFSELGFSTKFKRTLWSLIKGWSIGFILFSISVITAYILGGLDFHSYDVSKATIFYVVTLLPFWLIQSGTEELLTRGWLLPLINHRFHLAVAIGVSSTLFGILHLVNAHVTFLSIVSIICSGVLMSLYMIKSGNIWSVAALHGAWNFSQGNLYGIAVSGQKAGASLLHFTVKENAPDWISGGAFGIEGSLISIFVLLAAIIYLLWLIKTEETD |
| 4FC5 Chain:A ((11-269)) | -GNRGVLKVYLDYRRKNFNFLHNSTKMFLDNLERVLIVTG------------------FPIPPMMVAETDGPPGALAIYRAVEMLGGKAEILTYSEVEKALEPFGVSLARTPEPEDYSLIISVETPGRAADGRYYSMSALEIKRDPL----------------------DGIFLKARALGIPTIGVGDGGNEIGMGKIRELVVGHVPHGEKIASVVETDELIVSAVSNWGAYGLVAQASIEVGR----NLLEGWDERRVIEAISSAGLIDGVSKTLAPSVDG-IRLMVHEGIVELLKAVVDEAIK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270877 for 2431 contacts (-111.4/contact) +
2D Compatibility (PS) -27111 + (NN) -6527 + (LL) 4132
1D Compatibility (HY) 3600 + (ID) 1350
Total energy: -298133.0 ( -122.64 by residue)
QMean score : 0.208
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