Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFKDATAMAQAIKQHKVSSQELVEQAIYKIEEQNVSVNAVVSKQYNEARQAAKYANASNA------PFAGVPILLKDLGQNQKGQLSTSGSQLFKHYYAKQTDYLVQSFEKLGFIILGRTNTPEFGFKNISDSQLHGNVNLPFDHSRNAGGSSGGAAAAVSSGMVPIAGASDGGGSIRIPASFNGLIGLKPSRGRIPVGPSSYRGWQGASSHF----ALTKSVRDTKRLLYYLQSYQVE--SPFPLKKLSKESLFEFSVSKPLKIAVLMDSPLKTKVSSEAKAAIKEAADFLSQKGNHLELVEQPLDGIHSMKTYCMMNSVETA---AMFDGIEKSLGRSMEFSDMELMTWAMYQS---GQRVLAKDYSKLLDSWDQFAATMARFHENYDLILTAATNQPAPFHGQFDLDETLQKQLRHMREFSVSEQQDLIWKMFEDSMAWTPFTHQPNLTGQPSLAIPTHLTKEGLPLGVQLTAAKGREDLLLAVAELFEKEKQFKGPVCH |
| 2DF4 Chain:A ((15-475)) | ------------IKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKD-NIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRV-----SRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDI-KGLKVA-LPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLP-NTKFGIPSYYVIASSEASSNLSRFDGIRYGY-HSKEAHSLEEL-YKMSRSEGFGKEVKRRIF------LGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPV----NLAGLPGISVPCGQSN-GRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHDVYEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18310 for 4233 contacts (-4.3/contact) +
2D Compatibility (PS) -47056 + (NN) -10911 + (LL) 2048
1D Compatibility (HY) -20400 + (ID) 6000
Total energy: -100629.0 ( -23.77 by residue)
QMean score : 0.361
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