Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGTMILIAIIALFVIWLIV-AYNSLVRSRMHTKESWSQIDVQLKRRNDLIPNLIETVKGYAAYEGKTLEKIAELRAQVAKANTPAEAMTASNELTRQLSSILAVAENYPDLKANNSFVKLQEELTNTENKISYSRQLYNTTTSNYNVKLETFPSNIVGKLFGFKPSQFLETPEEEKEVPKVSFDF
2OAR Chain:A ((98-124))
--AAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTN------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OAR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12195 for 100 contacts (-122.0/contact) +
2D Compatibility (PS) -2754 + (NN) -1535 + (LL) 9736
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -10798.0 ( -107.98 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_2OAR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OAR-query.scw
PDB file :
Tito_Scwrl_2OAR.pdb
: