Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAI-----IREITGSRDVITTSRFPGTTLDKIEIPLDDGSYIFDTPGI-------IHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKNKMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI |
| 1U0L Chain:A ((145-248)) | ------------------------------------------------------------------------------------------------------------------------------------GLYPI--VKTSAKTGMGIEEL----KEYLKGKISTMAGLSGVGKSSLLNAINPGLKLR--------------TTTTAQLLK--FDFGGYVVDTPGFANLEINDIEPEELKHYFKEFGDKQCFFSDCNHVDEPECGVKEAVENGEIAESRYENYVKMFYELLGRR---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33007 for 409 contacts (-80.7/contact) +
2D Compatibility (PS) -8638 + (NN) -1641 + (LL) 14868
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -37218.0 ( -91.00 by residue)
QMean score : 0.366
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