Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISEEEVRHVANLSKLRFSDQETKEFASSLSKIVDMIELLNEVDTEGV-PVTTTMADRKTVMREDIAQPGNNRDDLFKNVPQHQDYYIKVPAILEDGGDA
3H0M Chain:C ((2-92))
--VDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFEE--TPMREDEPHPSLDREKALMNAPERKDGFFVVPRVV------
General information:
TITO was launched using:
RESULT:
Template:
3H0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8239 for 364 contacts (-22.6/contact) +
2D Compatibility (PS) -9567 + (NN) -4898 + (LL) 188
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -31266.0 ( -85.90 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3H0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H0M-query.scw
PDB file :
Tito_Scwrl_3H0M.pdb
: