Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEITWTVKYITEFIATAFLIILGNGAVAN--------VDLKGTKGNNSGWIIIAIGYGLGVMMPALMFGNVSGNHINPAFTLGLAFSGLFPWAHVGQYILAQILGAMFGQLVVVMVYQPYFVKTENPNHVLGSFSTISALDDGQKSSRKAAYINGFLNEFVGSFVLFFGALALTKNYFGVELVGKLVQAGYDQTTAATRISPYVTGSLAVAHLGIGFLVMTLVASLGGPTGPALNPARDLGPRIVHRLLPKQILGQAKEDSKWWYAWVPVLAPIVASILAVALFKLLYL |
2ZZ9 Chain:A ((19-231)) | ------------EFLAMLIFVLLSVGSTINWGGSNPLPVDM----------VLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTA----------------GHGLLVELIITFQLVFTIFASCD----------------DKRTD-------VTGSVALA---IGFSVAIGHLFAINYTGASMNPARSFGPAV--------IMGN------WENHWIYWVGPIIGAVLAGALYEYVFC |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ZZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -172063 for 1852 contacts (-92.9/contact) +
2D Compatibility (PS) -21496 + (NN) -8359 + (LL) 4616
1D Compatibility (HY) -21600 + (ID) 3550
Total energy: -222452.0 ( -120.11 by residue)
QMean score : 0.319
|
|
|