Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNVKDITRESWILSTFPEWGTWLNEEIEEEVVADGNFAMWWLGNCGVWIKTPGGANVVMDLWSNRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRAQPMVIDPFAINELDYYLVSHFHSDHIDINTAAAIINNPNLDHVKFVGPYECGEIWKKWGVPEERIIVIKPGESFEFKDIKVTAVESFDRTCLVTLPVDGAEEHDGELAGLAVTDEEMARKAVNYIFETPGGTIYHGADSHFSNYFAKHGKDYKIDVAINNYGDNPVGIQDKMTSIDLLRMAENLRAKVIIPVHYDIWSNFMASTDEILQLWKMRKERLQYDFHPFIWEVGGKYTYPQDKDRIEYHHPRGFDDCFEQESNIQFKALL |
3BV6 Chain:F ((26-379)) | -SKVNEITRESWILSTFPEWGTWLNEEIEQTVVEPNTFSMWWLGCTGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEIDAVLASHDHADHIDVNVAAAVLQNCG-EHVKFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIGDVKIRVLDSFDRTALVTLP-KGVSSYDKAIL------DGMDERAVNYLIETSGGSVYHSGDSHYSNYYAKHGNDYQIDVALLSYGENPRGVTDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYPTDKGRMHYQHFRGFQDIFKNEPELPYKAFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188615 for 2879 contacts (-65.5/contact) +
2D Compatibility (PS) -38611 + (NN) -18984 + (LL) 892
1D Compatibility (HY) -37600 + (ID) 9800
Total energy: -292718.0 ( -101.67 by residue)
QMean score : 0.510
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