Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEITAKLVKELREKSGAGVMDAKKALVETDGDLDKAIELLREKGMAKAAKKADRVAAEGLTGVYVDGNVAAVIEVNAETDFVAKNDQFVTLVNETAKVIAEGRPSNNEEALALTMPSGETLEQAFVTATATIGEKISFRRFALVEKTDEQHFGAYQHNGGRIGVITVVEGGDDALAKQVSMHVAAMKPTVLSYTELDAQFVHDELAQLNHKIEQDNESRAMVNKPALPFLKYGSKAQLTDEVIAQAEEDIKAELAAEGKPEKIWDKIVPGKMDRFMLDNTKVDQEYTLLAQVYIMDDSKTVEAYLESVNAKAVAFVRFEVGEGIEKASNDFEAEVAATMAAALEK |
3AVY Chain:A ((2-278)) | -AEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKA-------QFEEERVALVAKIGENINIRRVAALEG---DVLGSYQH-GARIGVLVAAKGADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEY---------------------------------------QVQLDIAMQ---SGKPKEIAEKMVEGRMKKFT-------GEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMSKQSHMS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -88403 for 2078 contacts (-42.5/contact) +
2D Compatibility (PS) -30345 + (NN) -14525 + (LL) 3996
1D Compatibility (HY) -16800 + (ID) 6500
Total energy: -152577.0 ( -73.42 by residue)
QMean score : 0.516
|
|
|