Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMVLERERFMTESDIKVIKRDGRLVSFDKYKIYTALLKASNKVIKMSPLVEAKLEMIADHVIAEIYNRFKDNIKIYEIQNIVEHKLLEANEYAIAQEYINYRTQRDFERSQATDINFSIGKLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKMLPSHVANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLANGFK-IGNAEVESPKSIQTATAQISQIIANVASSQYGGCTADRIDEFLAPYAQLNYQKHLKDAKEWVIEDKQEDYARAKTQKDIYDAMQSLEYEINTLFTSNGQTPFTSLGFGLGTNWF------EREIQKAILKIRIQGLGS-------------EHRTAIFPKLIFTL--KKGLNLEEDSPNYDIKQLALECATKRMYPDVLSYDKIIDLTGSFKAPMGCRSFLQGWRDANGQDVTSGRMN-----------LGVVTVNLPRVAMESNGDMDKFWEIFNERMSIARDALVYRVERVKEAIPANAPILYQYGAFGERLGKYDNVDRLFNHRRATVSLGYIGLYEVASVFYGGDWED------NHQAKAFTVDIVRKMKQLCADWSDEYDYHFSVYSTPSESLTDRFCRLDTEKFGIVTDITDKEYYTNSFHYDVRKNPTPFEKLDFEKIYPETGASGGFIHYCEYPVLQQNPKALEAVWDYAYDRVGYLGTNTPIDKCYQCQ-FEGDFTPTDRGFTCPNCGNSDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVKHMNGSSIKNQGN |
| 4COL Chain:A ((96-623)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------KGVADEFVEAQINGAVYLHDRHHAALMPY--CFAYTLKPIVEKGLPFIKTIKSEPAKHLSTFIQHVIQFVM-FASNQSSGAVG------LPDFFVWMWYFVKKDLKEGIIPRDKLDWY-------IEQHFQILTYSLNQPIRTT-QSPYTNFTY-LDRNYIKAIFEGERYPDGSLITDHVEDIIALQKHYWEWVSRERERQMFTFPVLTASLLYKDGKFLDEDSARF-INKINMKWQDTNWYIS----DSIDAVAS----------------------KLKGRMNSIGGSDLNIGSFKVITVNLPRIALESGGDREKYLQILRHRVQLIKKALAAVREIIKERISEGLLPLYENGLM------------LLNRQYGTI--GVTGVWESASIM-GLTTEDIDGLKYTEEGEVFVDNVLDTIREEAEKGYHEYGFTFNIEQVPAEKAAVTLAQKDRFLFG---EKQPFEIYSNQW-VPLMANTDVLNRIRYSGKWDKKVSGGAILHINL-----TEEESFNMVKMIADMGVMYFAFNTKISVCEDGHAFYGE--------RCPVCGKAK---VDEYMRIVGYLVPVSAFN-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4COL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173066 for 3676 contacts (-47.1/contact) +
2D Compatibility (PS) -49205 + (NN) -13922 + (LL) 17032
1D Compatibility (HY) -30800 + (ID) 6300
Total energy: -256261.0 ( -69.71 by residue)
QMean score : 0.332
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