Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------MTQQYIVEPKKGLGLKLKKGQILKVVDVEGQQVAD-----FVAYHAKDFYEHLDQGATIDANHS-------IHVKV-----NDHLYSNLYKPMLTLIEDTVGKHDLLLPACRPDMNRLLYGKQKDEFQDTCYDNMNRALEQFGVPKPHMHY-PFAIFMNTVLDEKGNLSVETPLSNAGDYVRLRAEMDLIVAFSSCPIEKGKCNGDS------VTSIRVEVS--------------
4TQ0 Chain:A ((4-273))DKDVLRDVWFGRIPTCFTLYQEAEPYYLLLPRVSYLTLVTDKVKKHFQKVMEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQ--FWAINRKLMEYPAEENGFRYIPFRIYQTTT-ERPFIQKLFRPVAADGQLHTLGDLLKEVC--PSAIKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIIPQP


General information:
TITO was launched using:
RESULT:

Template: 4TQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 723 -66034 -91.33 -342.15
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -91.33
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.120

(partial model without unconserved sides chains):
PDB file : Tito_4TQ0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TQ0-query.scw
PDB file : Tito_Scwrl_4TQ0.pdb: