Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTERLLRYFRDKQQDVQSEKTYDTQCPFCSMQCKMQLVE---QTIVTRKKYTAIGIDNPTTQGRLCIKGMNAHQHALNSSRITRPLLK-------KNGEFMPVSWEEALNHIKDQVTMIQTEHGHDAMAVYGSASITNEEAYLLGKFARVGLQTKYIDYNGRLCMSAAATAANQTFGADRGLTNPLSDIPHTRVIILAGTNIAECQPTIMPYFEKAKENGAYFIAIDPRETATTKIADLH---LKIKPGTDAALANGLVKIIIDEQLINEDFIQSRTN----------------------------------GFEELKQHTDSLDLNDIAEQTSVSLVDIRKAAVKFAK-ETSGMLFTARGIEQQTDGTAAVKGFLNMVLITGKIGKPYSGYGAITGQGNGQG-AREHGQKADQLPGYRSIENEEHRAHIAKVWGIHQDELPRK-GVSAYEMMEKINDGDIKGLFLMCSNPAVSSPNANLVKKALRR--LTFFVAIDLFISETAKYADVILPASSYLEDEGTMTNVEGRVTLREASRPCPGEAKHD-WQI----------------ICDLASAL-GKGRY----------------------------FSYTSAEDIFNELREASRGGIADYSGI-SYGRLRREGGIHWPCPESDH--------------PGTGRLFTESFAHPDQKAALSVIPNEPPVPKEKPTADYPLYLTTGRVMSHYLTGVQTRKSAALAARHFESFMEIHPQTAATYNIEDRVLVKIESPRGSITVR--SKLSEQIRKDTVFVPIHWADA-QNVNDLIGEALDPACKMPGFKVCAVRIIPI
1OGY Chain:A ((19-799))-------------------------CRFCGTGCGVMVGTRDGQVVATHGDTQA-----EVNRGLNCVKGYFLSKIMYGEDRLTTPLLRMKDGVYHKEGEFAPVSWDEAFDVMAAQAKLVLKEKAPEAVGMFGSGQWTIWEGYAASKLMRAGFRSNNLDPNARHCMASAATAFMRTFGMDEPM-GCYDDFEAADAFVLWGSNMAEMHPILWSRLTDRRLSHEH-VRVAVLSTFTHRSSDLSDTPIIFRPGTDRAILNYIAHHIISTGRVNRDFVDRHTNFALGATDIGYGLRPEHQLQLAAKGAADAGAMTPTDFETFAALVSEYTLEKAAEISGVEPALLEELAELYADPDRKWMSLWTMGFNQHVRGVWANHMVYNLHLLTGKISEPGNSPFSLTGQPFACGTAREVGTFAHRLPADMVVTNPEHRAHAEEIWKLPAGLLPDWVGAHAVEQDRKLHDGEINFYWVQVNNNMQAAPNIDQETYPGYRNPENFIVVSDAYPTVTGRAADLVLPAAMWVEKEGAYGNAERRTHFWHQLVEAPGEARSDLWQLMEFSKRFTTDEVWPEEILSAAPAYRGKTLFEVLFANGSVDRFPASDVNPDHANHEAALFGFYPQKGLFEEYAAFGRGHGHDLAPFDTYHEVR---GLHWPVVEGEETRWRYREGFDPYVKPGEGLRF---YGKPDGRAVILGVPYEPPA--ESPDEEFGFWLVTGRVLEHWHSGSMTLRWPELYKAFPGAVCFMHPEDARSRGLNRGSEVRVISRRGEIRTRLETRGRNRMPRGVVFVP--WFDASQLINKVTLDANDPISRQTDFKKCAVKI---


General information:
TITO was launched using:
RESULT:

Template: 1OGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4358 -238105 -54.64 -358.05
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -54.64
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.392

(partial model without unconserved sides chains):
PDB file : Tito_1OGY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OGY-query.scw
PDB file : Tito_Scwrl_1OGY.pdb: