Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTDDMTKDNINQQTLQRGLKNRHIQLIAIGGAIGTGLFLGSGKSIHFAGPSILFAYMITGIICFLIMRSLGELLLSNLNYHSFVDFVQDYLGDMAAFITGWTYWFCWISIAMADLTAVGLYTQYWLPGVPQWVPGLIALIILLIMNLATVKLFGELEFWFALIKVIAILALIVIGLVMIFKGFSTSSGVSSFTNLWSHGGLFPNGMHGFILSFQMVVFAFVGIELVGLTAGETENPEKVIPKAINNIPV-RVLLFYIGALLVIMSIYPWDIINPSESPFVQVF------VAVGIVGAASIINFVVLTSAASACNSAVFSTSRMVYSLAKDHNAPESMAKLTQRKVPRNALFFSAIVILIGVTLNYIMPEGVFTLITSISTVCFIYIWGITVICHMKYRKTRPELAKTNKFKLPLYPFTNYLILAFLAFVLVVLALAQDTRVSLFVTPVWFILLIVIYKVRKAKHQ
4DJI Chain:A ((202-342))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVI-PGNEINLSAG-VMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVP-----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 165 -28368 -171.92 -218.21
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -171.92
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.132

(partial model without unconserved sides chains):
PDB file : Tito_4DJI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DJI-query.scw
PDB file : Tito_Scwrl_4DJI.pdb: