Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKYEIIANEMRNRIKNNVYPIDQPIPDEVSLAKEFNSSRMTMKRALDNLVAEGLLFRKRGHGTFIIQSAIQDDHVHVVSNEILGLTNLLK-DKKIKSKVIQFEVQFPTEEVAAHLSIDQKTPVYYVVRLRIVEGEPYVLEKTYMPTHLIPGINDDVLHDSIYNHITNVLQLKIAGTHR--------KIRACKSDHIDQQHLGCKQDDPILEVEHVGFL--DTGIPFEYSFSRHRHDKFVVTSVNIRR
3EDP Chain:A ((11-233))---FEVIASKIKDSINRDEYKTG--MPNETALQEIYSSSRTTIRRAVDLLVEEGLVVRKNGVGLYV--------QPKLTAQNILEMTGVMKN---LKKDIKDFYIRKAGKFYAEIFGMKENELVYSIKFVQKSE-HGATLDRLILPLGLYPDLQAKDF------QIINIIELVNSGKYKLFELEQELQLILAGNEQIKNMHLN--ENDPVFKLSSVFYAENDMPIAIQYHYEDAESTKYVV-------


General information:
TITO was launched using:
RESULT:

Template: 3EDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 942 -91480 -97.11 -446.24
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -97.11
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_3EDP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EDP-query.scw
PDB file : Tito_Scwrl_3EDP.pdb: