Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNPGQDREKIVNIEERIPKIKEQRKQKANRRLISFIMLFFIMVLIIVYLQTPISKVSTISVTGNENVSKKEIIDLSDINSGDTEFWSLDKQKTEKKIQQNKLVKKAEISKSLPNKINIAIEEYKAIAYLEKDDVYYEVLENGSVLPNEVTPDDAGPILVNWTNAKKRSQMAKQLDALSNSLKQSISEIYYTPVKMDENRIKLYMNDGYVVTASIKTFADRMKTYPSIISQLSSNKKGIIHLEVATYFEEFGKNDKAAKKEDEN
5D0O Chain:A ((24-99))-----------------------------------------------------FVVKDIHFEGLQRVAVGAALLSMPVRTGD-TVNDEDISNTIRALFATGNFEDVRVLRD-GDTLLVQVKERPTIASITF------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5D0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 267 -29924 -112.07 -393.73
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -112.07
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.397

(partial model without unconserved sides chains):
PDB file : Tito_5D0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D0O-query.scw
PDB file : Tito_Scwrl_5D0O.pdb: