Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVTYWTGENLTLRAIQPEDIVIFDSLDDEILRNMDSLHFPR---SANNMREWVEEQLEKD-EFRFIAVESDNNIVGMIETFDCDRKNGTFGYYLAVFEPYRGKGFAKEMILMVLRFFFLELAYQKVNTTVYSFNNPSIRLHEKLGFMKEGQLRKIIFTKGAYYDGICFGMTREEFELNHG
4R87 Chain:A ((8-160))----------LTLRALERGDLRFIHNLNNN--RNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQD----------------


General information:
TITO was launched using:
RESULT:

Template: 4R87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 539 -15113 -28.04 -101.43
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -28.04
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_4R87.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R87-query.scw
PDB file : Tito_Scwrl_4R87.pdb: