Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVKKLVVVSMLSSIAFVLMLL-NFPFPGLPDYLKIDFSDVPAIIAILIYGPLAGIAVEAIKNVLQYIIQGSMAGVPVGQVANFIAGTLFILPTAFLFKK-LNSAKGLAVSLLLGTAAMTILMSILNYVLILPAYTWFLHSPALSDSALKTAVVAGILPFNMIKGIVITVVFSLIFIKLKPWIEQQRSAHIH
4HZU Chain:S ((4-164))GSLKENTIAAVLIAMTVALSILVVIPIPA--TKGIVTLCEVGIYTSAILYGRRMGLLVGGASGFLIDILTGY----PVWCLFSLVIHGTQGLVVGWLLPRHHKGIRSMLLPLLVGSLVMVIGYCLATTLL----F----G---------WP-AGLASIFGNVVQVGFGAGVTLSIVGPLTRLKPD-------


General information:
TITO was launched using:
RESULT:

Template: 4HZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 715 -135258 -189.17 -850.68
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain S : 0.68

3D Compatibility (PKB) : -189.17
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_4HZU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HZU-query.scw
PDB file : Tito_Scwrl_4HZU.pdb: