Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYIQLQDVHAFRRVRSKFKCKARFINRKGFPFLLLKSKLNIGFTIGFAIFFILLFLLSNMVWKIDVTGAKPETEHQMRQHLNEIGVKKGRLQFLMMSPEKIQKSLTNGIDNITWVGVDLKGTTIHMKVVEKNEPEKEKYVSPRNIVAKKKATITRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVASKAEIYGETWYRSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTEQEKHSLHFLGFKLPVSYVKEQTRESEEALRKYTKE--EAVQEGIK-LGKQDVEDKIGENGEVKSEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE
4UN5 Chain:B ((755-858))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGRHKPENIVIEMAR-------KNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGR-------------------------


General information:
TITO was launched using:
RESULT:

Template: 4UN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 100 20269 202.69 349.47
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain B : 0.55

3D Compatibility (PKB) : 202.69
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_4UN5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UN5-query.scw
PDB file : Tito_Scwrl_4UN5.pdb: