Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRNKRRNRQIVVAVNGGKAVKAIFLFIVSLIVIFVLSGVLTSLRPELRPSSDSFYGIAEELPGDVFAHLLQMENHYFASDLSQTDSSFHLSRLSLKLATSINLEDPRSFLGRELPGFAQFDTEILLAGQGTDYTNMPAESPPPSKVMEEEREANLAEIEKQQTQSDNAQKDPPKQTTGDKKVVFIYHTHNTESYLPLLKGETDPDMARHSKANVTLVGDMFGQALESQGIGATVNKTDIQSKLNKKGLNYAR-----------SYDESRPVVKDALASNKNLQYIIDIHRDSRRKKDTTATIKGKSYARVAFVVGKKSKNFEEN-----YKIASELHKLMEKKYPGLSTGVFSKGSPGDNGVYNQDLTDRALLLEFGGVDNNLEELQRAANAAADVFSEMYWDAEKVNAASGETKKQ
3EBH Chain:A ((252-389))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDWF--QLTLKEGLTVHRENLFSEEMTKTVT----TRLSHVDLLRSVQFLEDSSPLSHPIRPESYVSMENFY---TTTVYDKGS-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3EBH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 354 13672 38.62 112.07
target 2D structure prediction score : 0.27
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 38.62
2D Compatibility (Sec. Struct. Predict.) : 0.27
1D Compatibility (Hydrophobicity) : 0.58
QMean score : -0.003

(partial model without unconserved sides chains):
PDB file : Tito_3EBH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EBH-query.scw
PDB file : Tito_Scwrl_3EBH.pdb: