Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGLQFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQGLEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETTCLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQTEYENQFPESEFLLALGELEERMDVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKDEAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLG--WNGAEGFTHTEDQPIEGK--------LLIIDEASML--DI---------WL--ANHLFKAIPDHIQIIIVGDEDQLPSVGPGQ---VLRD-----------LLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNN---LTAPTKDRSFIRCGGSQIKEVVEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEITSIFYAKENTEKEDMAVVSFD---GNEMTFTKKD----------FNQF--THAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ
5FTD Chain:A ((24-392))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFVTGKAGSGKTTFLKYLIEKSGK-----------------NCIVAAPTGIAA------INAGGVTLHSLFGIPFGPITPYDRLENKFSEYKVELLLKMELLIIDEISMVRPDILDTIDRKLRWVYESDEPFGGV----QVIMFGDLFQLPPVTKKQEREILSDFYDGFFFFNALVFKRTGFHIVELTKIFRQTE-PEFINVLNNIRNYQVTSDELDLLSELKDR---KISSSYDNEYIHICTHKA--------DVEKINADKLGEQEIRNYDIVIKDKF-PESSIPCDLHLK---LRVGARVMSLVNDSLKGYYNGMLGIVTALEDNVITVRMDNGRTIKFERYTWSNTQYTLKDNEIVKEEIGSCTQFPLTLAWAITIHKSQGLTFDKIIIHVSHTFC----PGQLYVALSRCR---------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1259 -20457 -16.25 -65.15
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -16.25
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.301

(partial model without unconserved sides chains):
PDB file : Tito_5FTD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FTD-query.scw
PDB file : Tito_Scwrl_5FTD.pdb: