Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MDVRNKTLWILRDYVYILIGAAITAVSFNVFLLPNKIAAGGVSGISTILQSYGFEAAYVQWIINIPLFIAGVILLGGKFGLKTLAGSVFLPLVVFLTRDIQPATHHELLAAIFGGVGIGIGIGIVYLGKGSTGGTALAAQIIHKYSGLSLGKCLAIIDGMIVVTAMIVFNIEQGLYAMLGVYVSSKTIDVVQVGFNRSKMALIITKQ--EQAVKEAVLQKIDRGVTKISAVGGYTDD----------------DRPILMCVVGQTEFTKLKQIVKQIDE-----SAFVIVADASEVLGEGFKRA 2NS1 Chain:B ((6-106)) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEFSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI-----

General information: TITO was launched using: RESULT: Template: 2NS1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 233 9770 41.93 125.25 target 2D structure prediction score : 0.65 Monomeric hydrophicity matching model chain B : 0.45 3D Compatibility (PKB) : 41.93 2D Compatibility (Sec. Struct. Predict.) : 0.65 1D Compatibility (Hydrophobicity) : 0.45 QMean score : 0.561

(partial model without unconserved sides chains): PDB file : Tito_2NS1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2NS1-query.scw PDB file : Tito_Scwrl_2NS1.pdb: